3D mesh class More...

Inheritance diagram for Feel::Mesh3D< Shape, T, IndexT >:

Collaboration diagram for Feel::Mesh3D< Shape, T, IndexT >:

Static Public Attributes
static const uint16_type	nDim = 3

static const uint16_type	nRealDim = 3

Typedefs
typedef VisitableBase ::return_type	return_type

typedef VisitableBase	super_visitable

typedef MeshBase< IndexT >	super

using	index_type = typename super::index_type

using	size_type = typename super::size_type

typedef Elements< Shape, T >	super_elements

typedef super_elements::elements_type	elements_type

typedef super_elements::element_type	element_type

typedef super_elements::element_iterator	element_iterator

typedef super_elements::element_const_iterator	element_const_iterator

typedef super_elements::update_element_neighbor_type	update_element_neighbor_type

typedef element_type::node_type	node_type

typedef element_type::edge_permutation_type	edge_permutation_type

typedef element_type::face_permutation_type	face_permutation_type

typedef Points< 3, T >	super_points

typedef super_points::points_type	points_type

typedef super_points::point_type	point_type

typedef Faces< typename Shape::template shape< 2 >, typename super_elements::element_type >	super_faces

typedef super_faces::faces_type	faces_type

typedef super_faces::face_type	face_type

typedef super_faces::face_iterator	face_iterator

typedef super_faces::face_const_iterator	face_const_iterator

typedef super_faces::face_reference_wrapper_iterator	location_face_iterator

typedef super_faces::face_reference_wrapper_const_iterator	location_face_const_iterator

typedef Edges< typename Shape::template shape< 1 >, face_type >	super_edges

typedef super_edges::edges_type	edges_type

typedef super_edges::edge_type	edge_type

typedef super_edges::edge_iterator	edge_iterator

typedef super_edges::edge_const_iterator	edge_const_iterator

typedef std::pair< size_type, size_type >	edge_pair_type

typedef Mesh3D< Shape, T >	self_type

typedef std::shared_ptr< self_type >	self_ptrtype

typedef super::face_processor_type	face_processor_type

typedef boost::tuple< size_type, int >	element_edge_type
	Tuple that contains. More...

static const size_type	SHAPE = Shape::Shape

Methods
class	boost::serialization::access

void	setWorldComm (worldcomm_ptr_t const &_worldComm) override

void	clear () override
	clear out all data from the mesh, `isEmpty()` should return `true` after a `clear()` More...

	FEELPP_DEFINE_VISITABLE ()

void	renumber () override
	dummy implementation More...

void	updateEntitiesCoDimensionTwo () override
	update the entities of co-dimension 2 More...

void	updateEntitiesCoDimensionOnePermutation ()
	update permutation of entities of co-dimension 1

Constructors, destructor
	Mesh3D (std::string const &name="", worldcomm_ptr_t const &worldComm=Environment::worldCommPtr())
	default constructor

	Mesh3D (Mesh3D const &m)=default

	Mesh3D (Mesh3D &&m)=default

	~Mesh3D () override
	destructor

Operator overloads
Mesh3D &	operator= (Mesh3D const &m)=default

Mesh3D &	operator= (Mesh3D &&m)=default

Accessors
bool	isEmpty () const override

size_type	numElements () const override

size_type	numLocalFaces () const

uint16_type	numLocalTopologicalFaces () const
	the number of topological faces per element More...

size_type	numLocalEdges () const

size_type	numLocalVertices () const

size_type	numFaces () const override

size_type	numEdges () const

size_type	numPoints () const override

FEELPP_DEPRECATED element_edge_type const &	localEdgeId (element_type const &e, size_type const n) const

FEELPP_DEPRECATED element_edge_type const &	localEdgeId (size_type const e, size_type const n) const

Additional Inherited Members
Public Types inherited from Feel::VisitableBase< R, CatchAll >
typedef R	return_type

Public Types inherited from Feel::MeshBase< uint32_type >
using	super = CommObject

using	index_type = uint32_type
	type of indices : default to uint32_type

using	index_t = index_type

using	size_type = index_type

typedef boost::tuple< index_type, index_type >	face_processor_type
	Tuple that contains. More...

typedef SubMeshData< index_type >	smd_type

typedef std::shared_ptr< smd_type >	smd_ptrtype

Public Types inherited from Feel::JournalWatcher
using	function_update_information_type = std::function< void(nl::json &)>

using	notify_type = nl::json

Public Member Functions inherited from Feel::VisitableBase< R, CatchAll >
virtual return_type	accept (VisitorBase &)=0
	accept visitor: use S_DEFINE_VISITABLE() to redefine it

virtual return_type	accept (VisitorBase *)=0
	accept visitor: use S_DEFINE_VISITABLE() to redefine it

Public Member Functions inherited from Feel::MeshBase< uint32_type >
virtual void	updateForUse ()=0
	update all info for this mesh.

virtual void	updateForUse (size_type components)
	update all info for this mesh according the `components` More...

virtual void	updateForUseAfterMovingNodes (bool upMeasures=true)=0
	update the mesh when nodes have moved

virtual void	partition (const rank_type n_parts)=0
	Call the default partitioner (currently `metis_partition()`).

virtual void	meshModified ()=0

void	setSubMeshData (smd_ptrtype smd)
	set sub mesh data

smd_ptrtype	subMeshData () const
	return sub mesh data

bool	hasSubMeshData () const

smd_type::mesh_ptrtype	subMesh () const

smd_type::mesh_ptrtype	parentMesh () const

bool	isSubMesh () const
	true if is a sub mesh

bool	isSubMeshFrom (MeshBase const *m) const

bool	isSubMeshFrom (std::shared_ptr< MeshBase > m) const

bool	isParentMeshOf (MeshBase const *m) const

bool	isParentMeshOf (std::shared_ptr< MeshBase > m) const

bool	isSiblingOf (MeshBase const *m) const

bool	isSiblingOf (std::shared_ptr< MeshBase > m) const

bool	isSameMesh (M const *m) const

bool	isSameMesh (std::shared_ptr< M > m) const

bool	isRelatedTo (M const *m) const

bool	isRelatedTo (std::shared_ptr< M > m) const

size_type	subMeshToMesh (size_type id) const

size_type	subMeshToMesh (std::shared_ptr< MeshBase > m, size_type id) const

size_type	meshToSubMesh (size_type id) const

std::pair< std::vector< size_type >, bool >	meshToSubMesh (std::vector< size_type > const &p, bool add_invalid_indices=false) const

size_type	meshToSubMesh (std::shared_ptr< MeshBase > m, size_type id) const

void	addMeshWithNodesShared (std::shared_ptr< MeshType > m)
	store a mesh which has nodes shared with the current mesh

void	addMeshWithNodesShared (std::shared_ptr< const MeshType > m)
	store a mesh which has nodes shared with the current mesh

std::vector< std::shared_ptr< MeshBase< uint32_type > > >	meshesWithNodesShared () const
	get all meshes which share the nodes with the current mesh (current mesh is also include)

void	attachMeshSupport (MeshSupportBase *ms) const
	attach a mesh support

void	detachMeshSupport (MeshSupportBase *ms) const
	detach a mesh support

std::vector< MeshSupportBase * > const &	meshSupportsAttached () const
	return all mesh supports attached

bool	hasAllMarkers (std::initializer_list< std::string > l)

bool	hasAnyMarker (std::initializer_list< std::string > l)

bool	hasMarker (std::string const &marker) const

bool	hasElementMarker (std::string const &marker) const

bool	hasFaceMarker (std::string const &marker) const

bool	hasEdgeMarker (std::string const &marker) const

bool	hasPointMarker (std::string const &marker) const

bool	hasMarkers (std::initializer_list< std::string > l) const

size_type	markerName (std::string const &marker) const

std::string	markerName (size_type marker) const

std::string	markerName (size_type marker, size_type dim) const

size_type	markerDim (std::string const &marker) const

std::map< std::string, std::vector< size_type > >	markerNames () const

void	setMarkerNames (std::map< std::string, std::vector< size_type > > const &m)
	set the marker names

void	addMarkerName (std::pair< std::string, std::vector< size_type > > const &marker)
	add a new marker name

void	addMarkerName (std::string __name, int __id, int __topoDim)
	add a new marker name

flag_type	markerId (boost::any const &marker) const

std::set< flag_type >	markersId (boost::any const &marker) const

	MeshBase ()

	MeshBase (worldcomm_ptr_t const &w)

	MeshBase (MeshBase const &)=default

	MeshBase (MeshBase &&)=default

	MeshBase (uint16_type topodim, uint16_type realdim, worldcomm_ptr_t const &worldComm=Environment::worldCommPtr())
	build from a topological dimension, a real dimension and a communicator

	MeshBase (std::string const &name, uint16_type topodim, uint16_type realdim, worldcomm_ptr_t const &worldComm=Environment::worldCommPtr())
	build from a name, a topological dimension, a real dimension and a communicator

	~MeshBase () override

MeshBase &	operator= (MeshBase const &m)=default

MeshBase &	operator= (MeshBase &&m)=default

virtual std::shared_ptr< MeshBase< uint32_type > >	shared_from_this_meshbase ()=0
	return current shared_ptr of type MeshBase

virtual std::shared_ptr< const MeshBase< uint32_type > >	shared_from_this_meshbase () const=0
	return current shared_ptr of type MeshBase

bool	isUpdatedForUse () const

uint64_type	functionSpaceStructuralRevision () const noexcept
	Return the revision used to invalidate mesh-based function spaces. More...

uint64_type	geometryRevision () const noexcept
	Return the coordinate-only geometry revision. More...

void	setTopologicalDimension (int d)
	set the topological dimension

void	setRealDimension (int d)
	set the real dimension

virtual size_type	numGlobalElements () const=0

virtual size_type	numGlobalFaces () const=0

virtual size_type	numGlobalEdges () const=0

virtual size_type	numGlobalPoints () const=0

virtual size_type	numGlobalVertices () const=0

size_type	numVertices () const

rank_type	numberOfPartitions () const
	Returns the number of partitions.

bool	isPartitioned () const

Context const &	components () const

Context &	components ()

bool	isParametric () const

void	setNumberOfPartitions (rank_type n)
	set the number of partitions

void	setNumVertices (size_type n)
	set the number of vertices

void	setComponents (size_type components=MESH_ALL_COMPONENTS)
	set the components to be updated by `updateForUse()` More...

void	setParametric (bool x)
	set if the mesh is parametric ( e.g. More...

Public Member Functions inherited from Feel::CommObject
WorldComm const &	comm () const

	CommObject (CommObject &&)=default

	CommObject (CommObject const &)=default

	CommObject (worldcomm_ptr_t &w)

	CommObject (worldcomm_ptr_t const &w)

bool	hasWorldComm () const
	returns true if worldcomm is allocated, false othewise

CommObject &	operator= (CommObject &&)=default

CommObject &	operator= (CommObject const &)=default

virtual void	setWorldComm (worldcomm_ptr_t const &w)

virtual void	setWorldComm (worldcomm_t &w)

worldcomm_ptr_t &	subWorldCommSeqPtr ()

worldcomm_ptr_t const &	subWorldCommSeqPtr () const

WorldComm &	worldComm ()

WorldComm const &	worldComm () const

worldcomm_ptr_t &	worldCommPtr ()

worldcomm_ptr_t const &	worldCommPtr () const

Public Member Functions inherited from Feel::JournalWatcher
	JournalWatcher (std::string const &category="", std::string const &name="", bool connect=JournalManager::journalAutoMode())
	Constructors. More...

	JournalWatcher (std::string const &category, bool useDefaultName, bool connect=JournalManager::journalAutoMode())

	JournalWatcher (function_update_information_type const &func, std::string const &category="", std::string const &name="", bool useDefaultNameIfEmpty=true, bool connect=JournalManager::journalAutoMode())

	JournalWatcher (JournalWatcher const &jw)
	Copy constructor.

virtual	~JournalWatcher ()
	Default destructor. The (inherited) object is always disconnected from the journal during the destruction.

bool	journalIsConnected () const
	GettersCheck if the object is connected to the journal. More...

std::string const &	journalWatcherInstanceName () const
	Return the full instance name for this watched object. The name is composed with the base name and a suffix index corresponding to the nth call. More...

nl::json::json_pointer	journalSection () const
	Return the section into the journal as json_pointer.

nl::json const &	informationObject () const
	Return the information into property tree.

void	journalConnect ()
	Setters. More...

void	journalDisconnect ()
	Disconnect the derived object from the simulation info manager. The disconnection is safe.

virtual void	updateInformationObject (nl::json &p) const
	update information object into p More...

void	setInformationObject (nl::json const &informationObject)
	set information object

void	putInformationObject (nl::json const &informationObject)
	put information object

void	addInformationObject (nl::json const &informationObject)
	add information object

void	journalFinalize ()
	finalize journal publication

Protected Member Functions inherited from Feel::MeshBase< uint32_type >
void	setUpdatedForUse (bool u)
	Set whether the mesh is finalized and ready for use. More...

void	markGeometryChanged ()
	Advance the coordinate-only geometry revision.

virtual void	updateEntitiesCoDimensionOne ()=0
	update the entities of co-dimension 1

virtual void	check () const=0
	check mesh connectivity

Protected Member Functions inherited from Feel::JournalWatcher
void	applyUpdateInformationObject ()
	Protected Methods.

Static Protected Member Functions inherited from Feel::VisitableBase< R, CatchAll >
template<class T >
static return_type	acceptImpl (T visited, VisitorBase guest)
	give access only to the hierarchy More...

Protected Attributes inherited from Feel::MeshBase< uint32_type >
std::map< std::string, std::vector< size_type > >	M_markername
	marker name dictionary ( std::string -> <int,int> ) get<0>() provides the id get<1>() provides the topological dimension

Detailed Description

template<typename Shape, typename T = double, typename IndexT = uint32_type>
class Feel::Mesh3D< Shape, T, IndexT >

3D mesh class

// create a 3D mesh made of simplex of order 1
Mesh3D<Simplex<3,1> > mesh;
 
// create a 3D mesh made of simplex of order 2
Mesh3D<Simplex<3,2> > mesh;

Author: Christophe Prud'homme

See also

Member Typedef Documentation

◆ element_edge_type

template<typename Shape , typename T = double, typename IndexT = uint32_type>

typedef boost::tuple<size_type, int> Feel::Mesh3D< Shape, T, IndexT >::element_edge_type

Tuple that contains.

the index of the edge
+1 or -1 depending on the orientation

Member Function Documentation

◆ clear()

template<typename GEOSHAPE , typename T , typename IndexT >

void Feel::Mesh3D< GEOSHAPE, T, IndexT >::clear

overridevirtual

clear out all data from the mesh, isEmpty() should return true after a clear()

Reimplemented from Feel::MeshBase< uint32_type >.

◆ isEmpty()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

bool Feel::Mesh3D< Shape, T, IndexT >::isEmpty ( ) const

override

Returns: true if all containers are empty, false otherwise

◆ localEdgeId() [1/2]

template<typename Shape , typename T = double, typename IndexT = uint32_type>

FEELPP_DEPRECATED element_edge_type const & Feel::Mesh3D< Shape, T, IndexT >::localEdgeId	(	element_type const &	e,
		size_type const	n
	)		const

Returns: the edge index of the edge n in the element e

References Feel::edges().

◆ localEdgeId() [2/2]

template<typename Shape , typename T = double, typename IndexT = uint32_type>

FEELPP_DEPRECATED element_edge_type const & Feel::Mesh3D< Shape, T, IndexT >::localEdgeId	(	size_type const	e,
		size_type const	n
	)		const

Returns: the edge index of the edge n in the element e

◆ numEdges()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numEdges ( ) const

Returns: the number of edges

◆ numElements()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numElements ( ) const

overridevirtual

Returns: the number of elements

Implements Feel::MeshBase< uint32_type >.

◆ numFaces()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numFaces ( ) const

overridevirtual

Returns: the number of faces

Implements Feel::MeshBase< uint32_type >.

◆ numLocalEdges()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numLocalEdges ( ) const

Returns: the number of edges in an element

◆ numLocalFaces()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numLocalFaces ( ) const

Returns: the number of faces in an element

◆ numLocalTopologicalFaces()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

uint16_type Feel::Mesh3D< Shape, T, IndexT >::numLocalTopologicalFaces ( ) const

the number of topological faces per element

Returns: the number of topological faces per element

References Feel::elements().

◆ numLocalVertices()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numLocalVertices ( ) const

Returns: the number of vertices in an element

◆ numPoints()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

size_type Feel::Mesh3D< Shape, T, IndexT >::numPoints ( ) const

overridevirtual

Returns: the number of points

Implements Feel::MeshBase< uint32_type >.

◆ renumber()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

void Feel::Mesh3D< Shape, T, IndexT >::renumber ( )

overrideprotectedvirtual

dummy implementation

See also: Mesh

Implements Feel::MeshBase< uint32_type >.

◆ setWorldComm()

template<typename Shape , typename T = double, typename IndexT = uint32_type>

void Feel::Mesh3D< Shape, T, IndexT >::setWorldComm ( worldcomm_ptr_t const & _worldComm )

overridevirtual

Reimplemented from Feel::CommObject.

◆ updateEntitiesCoDimensionTwo()

template<typename GEOSHAPE , typename T , typename IndexT >

void Feel::Mesh3D< GEOSHAPE, T, IndexT >::updateEntitiesCoDimensionTwo

overrideprotectedvirtual

update the entities of co-dimension 2

Implements Feel::MeshBase< uint32_type >.

Static Public Attributes

Typedefs

Methods

Constructors, destructor

Operator overloads

Accessors

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ element_edge_type

Member Function Documentation

◆ clear()

◆ isEmpty()

◆ localEdgeId() [1/2]

◆ localEdgeId() [2/2]

◆ numEdges()

◆ numElements()

◆ numFaces()

◆ numLocalEdges()

◆ numLocalFaces()

◆ numLocalTopologicalFaces()

◆ numLocalVertices()

◆ numPoints()

◆ renumber()

◆ setWorldComm()

◆ updateEntitiesCoDimensionTwo()